| 
 |   | 
 | 
  | 
       2004 Publications 
- Kos, Š.;  Millis, A. J.;  Larkin, A. I.. Gaussian fluctuation corrections to the BCS mean-field gap amplitude at zero temperature. Physical Review B 2004 10.1103/PhysRevB.70.214531
 
- Kevrekidis, P. G.;  Dmitriev, S. V.;  Takeno, S.;  Bishop, A. R., et al. Rich example of geometrically induced nonlinearity: From rotobreathers and kinks to moving localized modes and resonant energy transfer. Physical Review E 2004 10.1103/PhysRevE.70.066627
 
- Tretiak, S.;  Piryatinski, A.;  Saxena, A.;  Martin, R. L., et al. On the existence of photoexcited breathers in conducting polymers. Physical Review B 2004 10.1103/PhysRevB.70.233203
 
- Paschek, Dietmar;  García, Angel E.. Reversible Temperature and Pressure Denaturation of a Protein Fragment: A Replica Exchange Molecular Dynamics Simulation Study. Physical Review Letters 2004 10.1103/PhysRevLett.93.238105
 
- Gómez-Gardeñes, J.;  Floría, L. M.;  Peyrard, M.;  Bishop, A. R.. Nonintegrable Schrödinger discrete breathers. Chaos: An Interdisciplinary Journal of Nonlinear Science 2004 10.1063/1.1811991
 
- Rivera, Michael K.;  Daniel, W. Brent;  Ecke, Robert E.. Coherent vortices in two-dimensional turbulence. Chaos: An Interdisciplinary Journal of Nonlinear Science 2004 10.1063/1.1821773
 
- Wingate, B. A.. The Maximum Allowable Time Step for the Shallow Water α Model and Its Relation to Time-Implicit Differencing. Monthly Weather Review 2004 10.1175/MWR2816.1
 
- Ben-Naim, E.;  Redner, S.. Winning quick and dirty: the greedy random walk. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/47/002
 
- Kevrekidis, P. G.;  Khare, Avinash;  Saxena, A.. Solitary wave interactions in dispersive equations using Manton’s approach. Physical Review E 2004 10.1103/PhysRevE.70.057603
 
- Mikulis, M.;  Reichhardt, C. J. Olson;  Reichhardt, C.;  Scalettar, R. T., et al. Re-entrant disordering of colloidal molecular crystals on two-dimensional periodic substrates. Journal of Physics: Condensed Matter 2004 10.1088/0953-8984/16/45/013
 
- Gonçalves, S.;  Kenkre, V. M.;  Bishop, A. R.. Nonlinear friction of a damped dimer sliding on a periodic substrate. Physical Review B 2004 10.1103/PhysRevB.70.195415
 
- Krichever, I.;  Mineev-Weinstein, M.;  Wiegmann, P.;  Zabrodin, A.. Laplacian growth and Whitham equations of soliton theory. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2004.06.003
 
- Hastings, M. B.. An mathsf{epsilon}-expansion for small-world networks. European Physical Journal B - Condensed Matter and Complex Systems 2004 10.1140/epjb/e2004-00383-6
 
- Holm, Darryl D.;  Putkaradze, Vakhtang;  Stechmann, Samuel N.. Rotating concentric circular peakons. Nonlinearity 2004 10.1088/0951-7715/17/6/008
 
- Piryatinski, A.;  Tretiak, S.;  Fenimore, P. W.;  Saxena, A., et al. Three-pulse photon-echo spectroscopy as a probe of the photoexcited electronic state manifold in coupled electron-phonon systems. Physical Review B 2004 10.1103/PhysRevB.70.161404
 
- Reichhardt, C.;  Olson Reichhardt, C. J.. Noise at the Crossover from Wigner Liquid to Wigner Glass. Physical Review Letters 2004 10.1103/PhysRevLett.93.176405
 
- Cruz-Pacheco, Gustavo;  Levermore, C. David;  Luce, Benjamin P.. Complex Ginzburg–Landau equations as perturbations of nonlinear Schrödinger equations: A Melnikov approach. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2004.07.012
 
- Kevrekidis, P. G.;  Konotop, V. V.;  Malomed, B. A.;  Bishop, A. R.. Nonlinearity from geometric interactions: A case example. Physical Review E 2004 10.1103/PhysRevE.70.047602
 
- Hastings, M. B.. Spin-orbit scattering and time-reversal symmetry: Detection of a spin by tunneling. Physical Review B 2004 10.1103/PhysRevB.70.161301
 
- Reichhardt, C.;  Reichhardt, C. J. Olson. Dynamic regimes and spontaneous symmetry breaking for driven colloids on triangular substrates. EPL (Europhysics Letters) 2004 10.1209/epl/i2004-10182-9
 
- Kalosakas, G.;  Rasmussen, K. Ø;  Bishop, A. R.;  Choi, C. H., et al. Sequence-specific thermal fluctuations identify start sites for DNA transcription. EPL (Europhysics Letters) 2004 10.1209/epl/i2004-10167-8
 
- Vanossi, Andrea;  Bishop, Alan R.;  Franchini, Anna;  Bortolani, Virginio. Modelling study of microscopic sliding on irregular substrates. Surface Science 2004 10.1016/j.susc.2004.06.015
 
- Hastings, M. B.. Decay of Correlations in Fermi Systems at Nonzero Temperature. Physical Review Letters 2004 10.1103/PhysRevLett.93.126402
 
- Rapti, Z.;  Trombettoni, A.;  Kevrekidis, P. G.;  Frantzeskakis, D. J., et al. Modulational instabilities and domain walls in coupled discrete nonlinear Schrödinger equations. Physics Letters A 2004 10.1016/j.physleta.2004.07.052
 
- Büttner, H.;  Gaididei, Yu B.;  Saxena, Avadh;  Lookman, Turab, et al. Domain wall junctions as vortices: static structure. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/36/002
 
- Shalizi, Cosma Rohilla;  Shalizi, Kristina Lisa;  Haslinger, Robert. Quantifying Self-Organization with Optimal Predictors. Physical Review Letters 2004 10.1103/PhysRevLett.93.118701
 
- Davidson, Bruce A.;  Ramazashvili, Revaz;  Kos, Simon;  Eckstein, James N.. Broken Particle-Hole Symmetry at Atomically Flat a-Axis YBa2Cu3O7-δ Interfaces. Physical Review Letters 2004 10.1103/PhysRevLett.93.107004
 
- KAMENEV, D. I.;  BERMAN, G. P.;  KASSMAN, R. B.;  TSIFRINOVICH, V. I.. MODELING FULL ADDER IN ISING SPIN QUANTUM COMPUTER WITH 1000 QUBITS USING QUANTUM MAPS. International Journal of Quantum Information 2004 10.1142/S0219749904000304
 
- Franco, Ignacio;  Tretiak, Sergei. Electron-Vibrational Dynamics of Photoexcited Polyfluorenes. Journal of the American Chemical Society 2004 10.1021/ja0489285
 
- Qiao, Zhijun. Integrable Hierarchy, 3×3 Constrained Systems, and Parametric Solutions. Acta Applicandae Mathematica 2004 10.1023/B:ACAP.0000038872.88367.dd
 
- BERMAN, G. P.;  KAMENEV, D. I.;  TSIFRINOVICH, V. I.. MINIMIZATION OF NONRESONANT EFFECTS IN A SCALABLE ISING SPIN QUANTUM COMPUTER. International Journal of Quantum Information 2004 10.1142/S0219749904000286
 
- Kiss, I. Z.;  Merkin, J. H.;  Neufeld, Z.. Homogenization induced by chaotic mixing and diffusion in an oscillatory chemical reaction. Physical Review E 2004 10.1103/PhysRevE.70.026216
 
- Koudella, Christophe R.;  Neufeld, Zoltán. Reaction front propagation in a turbulent flow. Physical Review E 2004 10.1103/PhysRevE.70.026307
 
- Fuentes, M. A.;  Maniadis, P.;  Kalosakas, G.;  Rasmussen, K. Ø., et al. Multipeaked polarons in soft potentials. Physical Review E 2004 10.1103/PhysRevE.70.025601
 
- Reichhardt, Charles M.;  Olson Reichhardt, Cynthia J.. Statics and dynamics of colloidal particles in periodic traps. Proc. SPIE 5514, Optical Trapping and Optical Micromanipulation 2004 10.1117/12.558964
 
- Chang, Chun-Min;  Castro Neto, A. H;  Bishop, A. R. Long-range charge transfer in periodic DNA through polaron diffusion. Chemical Physics 2004 10.1016/j.chemphys.2004.05.015
 
- Tiampo, K. F.;  Rundle, J. B.;  Klein, W.;  Ben-Zion, Y., et al. Using Eigenpattern Analysis to Constrain Seasonal Signals in Southern California. Pure and Applied Geophysics 2004 10.1007/s00024-004-2545-y
 
- Tiampo, K. F.;  Rundle, J. B.;  Klein, W.;  Martins, J. S. Sá. Ergodicity in Natural Fault Systems. Pure and Applied Geophysics 2004 10.1007/s00024-004-2542-1
 
- Bishop, A. R. Doped transition metal oxides: networks of local distortions correlated by elastic fields. Journal of Physics and Chemistry of Solids 2004 10.1016/j.jpcs.2003.07.002
 
- Fabijonas, Bruce R.;  Holm, Darryl D.. Euler–Poincaré formulation and elliptic instability for nth-gradient fluids. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/30/015
 
- Bourdel, T.;  Khaykovich, L.;  Cubizolles, J.;  Zhang, J., et al. Experimental Study of the BEC-BCS Crossover Region in Lithium 6. Physical Review Letters 2004 10.1103/PhysRevLett.93.050401
 
- Chowell, G.;  Hengartner, N. W.;  Castillo-Chavez, C.;  Fenimore, P. W., et al. The basic reproductive number of Ebola and the effects of public health measures: the cases of Congo and Uganda. Journal of Theoretical Biology 2004 10.1016/j.jtbi.2004.03.006
 
- Vanossi, Andrea;  Bishop, Alan R.;  Bortolani, Virginio. Role of substrate geometry in sliding friction. Nanotechnology 2004 10.1088/0957-4484/15/7/013
 
- Bussmann-Holder, A.;  Bishop, A. R.. Intrinsic local modes and heterogeneity in relaxor ferroelectrics. Journal of Physics: Condensed Matter 2004 10.1088/0953-8984/16/25/L02
 
- Berman, G. P.;  Bishop, A. R.;  Borgonovi, F.;  Dalvit, D. A. R.. Survival of quantum effects for observables after decoherence. Physical Review A 2004 10.1103/PhysRevA.69.062110
 
- Aivalis, Konstantinos G.;  Kurien, Susan;  Schumacher, Jörg;  Sreenivasan, Katepalli R.. Sign-symmetry of temperature structure functions. Physical Review E 2004 10.1103/PhysRevE.69.066315
 
- Kurien, Susan;  Taylor, Mark A.;  Matsumoto, Takeshi. Cascade time scales for energy and helicity in homogeneous isotropic turbulence. Physical Review E 2004 10.1103/PhysRevE.69.066313
 
- Batista, C. D.;  Aligia, A. A.. Exact Bond Ordered Ground State for the Transition between the Band and the Mott Insulator. Physical Review Letters 2004 10.1103/PhysRevLett.92.246405
 
- Lin, Anna L.;  Hagberg, Aric;  Meron, Ehud;  Swinney, Harry L.. Resonance tongues and patterns in periodically forced reaction-diffusion systems. Physical Review E 2004 10.1103/PhysRevE.69.066217
 
- Olson Reichhardt, C. J.;  Reichhardt, C.;  Martin, I.;  Bishop, A. R.. Dynamics and melting of stripes, crystals, and bubbles with quenched disorder. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2004.01.027
 
- Jarzynski, Christopher;  Wójcik, Daniel K.. Classical and Quantum Fluctuation Theorems for Heat Exchange. Physical Review Letters 2004 10.1103/PhysRevLett.92.230602
 
- Ben-Naim, E.;  Krapivsky, P. L.. Random geometric series. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/23/001
 
- BERMAN, G. P.;  KAMENEV, D. I.;  TSIFRINOVICH, V. I.. ANALYTIC SOLUTIONS FOR QUANTUM LOGIC GATES AND MODELING PULSE ERRORS IN A QUANTUM COMPUTER WITH A HEISENBERG INTERACTION. International Journal of Quantum Information 2004 10.1142/S0219749904000237
 
- Jorge, G. A.;  Jaime, M.;  Civale, L.;  Batista, C. D., et al. Thermodynamic properties of excess-oxygen-doped La2CuO4.11 near a simultaneous transition to superconductivity and long-range magnetic order. Physical Review B 2004 10.1103/PhysRevB.69.174506
 
- Reichhardt, C.;  Reichhardt, C. J. Olson;  Hastings, M. B.. Nonlinear dynamics, rectification, and phase locking for particles on symmetrical two-dimensional periodic substrates with dc and circular ac drives. Physical Review E 2004 10.1103/PhysRevE.69.056115
 
- Rasmussen, Kim O.;  Kalosakas, George;  Voulgarakis, N. K.;  Bishop, Alan R., et al. Thermally induced coherent vibrations in DNA. Proc. SPIE 5467, Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems II 2004 10.1117/12.548416
 
- Reichhardt, Charles M.. Noise near charge ordering transitions. Proc. SPIE 5469, Fluctuations and Noise in Materials 2004 10.1117/12.546861
 
- Eubank, Stephen;  Guclu, Hasan;  Anil Kumar, V. S.;  Marathe, Madhav V., et al. Modelling disease outbreaks in realistic urban social networks. Nature 2004 10.1038/nature02541
 
- Ben-Naim, E.;  Krapivsky, P. L.. Size of outbreaks near the epidemic threshold. Physical Review E 2004 10.1103/PhysRevE.69.050901
 
- Choi, Wooyoung;  Prasad, Dilip;  Camassa, Roberto;  Ecke, Robert E.. Traveling waves in rotating Rayleigh-Bénard convection. Physical Review E 2004 10.1103/PhysRevE.69.056301
 
- Ben-Naim, E.;  Krapivsky, P. L.. Unicyclic components in random graphs. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/18/L01
 
- Batista, C. D.;  Gubernatis, J. E.;  Bonča, J.;  Lin, H. Q.. Intermediate Coupling Theory of Electronic Ferroelectricity. Physical Review Letters 2004 10.1103/PhysRevLett.92.187601
 
- Ares, S.;  Sánchez, A.;  Bishop, A. R.. Super-roughening as a disorder-dominated flat phase. EPL (Europhysics Letters) 2004 10.1209/epl/i2004-10021-1
 
- Olson Reichhardt, C. J.;  Reichhardt, C.;  Hastings, M. B.;  Jankó, B.. Ratchet superconducting vortex cellular automata. Physica C: Superconductivity 2004 10.1016/j.physc.2003.11.040
 
- Reichhardt, C.;  Olson Reichhardt, C. J.. Ratchet effects for vortices in superconductors with periodic pinning arrays. Physica C: Superconductivity 2004 10.1016/j.physc.2003.09.094
 
- Reichhardt, C.;  Olson Reichhardt, C. J.. Directional locking effects and dynamics for particles driven through a colloidal lattice. Physical Review E 2004 10.1103/PhysRevE.69.041405
 
- Ben-Naim, E.;  Krapivsky, P. L.. Finite-size fluctuations in interacting particle systems. Physical Review E 2004 10.1103/PhysRevE.69.046113
 
- Fehske, H.;  Wellein, G.;  Hager, G.;  Weiße, A., et al. Quantum lattice dynamical effects on single-particle excitations in one-dimensional Mott and Peierls insulators. Physical Review B 2004 10.1103/PhysRevB.69.165115
 
- Olson Reichhardt, C. J.;  Hastings, M. B.. Do Vortices Entangle?. Physical Review Letters 2004 10.1103/PhysRevLett.92.157002
 
- Toroczkai, Zoltán;  Bassler, Kevin E.. Network dynamics: Jamming is limited in scale-free systems. Nature 2004 10.1038/428716a
 
- McMahon, Benjamin H.;  Fabian, Marian;  Tomson, Farol;  Causgrove, Timothy P., et al. FTIR studies of internal proton transfer reactions linked to inter-heme electron transfer in bovine cytochrome c oxidase. Biochimica et Biophysica Acta (BBA) - Bioenergetics 2004 10.1016/j.bbabio.2004.01.007
 
- Zhang, J.;  Li, N.. Analytical Solution on the Transient Corrosion/Precipitation in Non-Isothermal Liquid Lead Bismuth Eutectic Flow Loops. Corrosion 2004 10.5006/1.3287739
 
- Voulgarakis, N. K.;  Kalosakas, G.;  Rasmussen, K. Ø.;  Bishop, A. R.. Temperature-Dependent Signatures of Coherent Vibrational Openings in DNA. Nano Letters 2004 10.1021/nl0499084
 
- Zhang, Jinsuo;  Li, Ning. Heterogeneous ECE Processes at Channel Electrodes: Analytical Solution for all Reaction Rate Constants and Different Diffusion Coefficients. Electroanalysis 2004 10.1002/elan.200302856
 
- Fabijonas, Bruce R.;  Holm, Darryl D.. Craik–Criminale solutions and elliptic instability in nonlinear-reactive closure models for turbulence. Physics of Fluids (1994-present) 2004 10.1063/1.1638750
 
- Hastings, M. B.. Lieb-Schultz-Mattis in higher dimensions. Physical Review B 2004 10.1103/PhysRevB.69.104431
 
- Kalosakas, G.;  Rasmussen, K. Ø.;  Bishop, A. R.. Nonlinear excitations in DNA: polarons and bubbles. Synthetic Metals 2004 10.1016/j.synthmet.2003.08.020
 
- Choi, Chu H.;  Kalosakas, George;  Rasmussen, Kim Ø;  Hiromura, Makoto, et al. DNA dynamically directs its own transcription initiation. Nucleic Acids Research 2004 10.1093/nar/gkh335
 
- Zhang, Jinsuo;  Li, Ning. Corrosion/precipitation in non-isothermal and multi-modular LBE loop systems. Journal of Nuclear Materials 2004 10.1016/j.jnucmat.2004.01.013
 
- Dullin, H. R.;  Gottwald, G. A.;  Holm, D. D.. On asymptotically equivalent shallow water wave equations. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2003.11.004
 
- Reichhardt, C.;  Reichhardt, C. J. Olson. Local Melting and Drag for a Particle Driven through a Colloidal Crystal. Physical Review Letters 2004 10.1103/PhysRevLett.92.108301
 
- Kozma, B.;  Hastings, M. B.;  Korniss, G.. Roughness Scaling for Edwards-Wilkinson Relaxation in Small-World Networks. Physical Review Letters 2004 10.1103/PhysRevLett.92.108701
 
- Tsai, Peichun;  Daya, Zahir A.;  Morris, Stephen W.. Aspect-Ratio Dependence of Charge Transport in Turbulent Electroconvection. Physical Review Letters 2004 10.1103/PhysRevLett.92.084503
 
- Krapivsky, P. L.;  Ben-Naim, E.;  Grosse, I.. Stable distributions in stochastic fragmentation. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/8/002
 
- Anghel, M.;  Toroczkai, Zoltán;  Bassler, Kevin E.;  Korniss, G.. Competition-Driven Network Dynamics: Emergence of a Scale-Free Leadership Structure and Collective Efficiency. Physical Review Letters 2004 10.1103/PhysRevLett.92.058701
 
- Rasmussen, Steen;  Chen, Liaohai;  Stadler, Bärbel M. R.;  Stadler, Peter F.. Proto-Organism Kinetics: Evolutionary Dynamics of Lipid Aggregates with Genes and Metabolism. Origins of life and evolution of the biosphere 2004 10.1023/B:ORIG.0000009838.16739.40
 
- Rapti, Z.;  Kevrekidis, P. G.;  Smerzi, A.;  Bishop, A. R.. Variational approach to the modulational instability. Physical Review E 2004 10.1103/PhysRevE.69.017601
 
- Berman, G. P.;  Borgonovi, F.;  Izrailev, F. M.;  Smerzi, A.. Irregular Dynamics in a One-Dimensional Bose System. Physical Review Letters 2004 10.1103/PhysRevLett.92.030404
 
- ZHANG, Jinsuo;  LI, Ning. A Correlation for Steel Corrosion in Non-isothermal LBE Loops. Journal of Nuclear Science and Technology 2004 10.1080/18811248.2004.9715483
 
- Ahluwalia, R.;  Lookman, T.;  Saxena, A.;  Shenoy, S.R.. Pattern formation in Ferroelastic Transitions. Phase Transitions 2004 10.1080/01411590410001672620
 
- Fabijonas, Bruce R.;  Holm, Darryl D.. Multi-frequency CraikStokes equations. Journal of Fluid Mechanics 2004 10.1017/S0022112004008511
 
- Ben-Naim, E.;  Krapivsky, P. L.. Leadership statistics in random structures. EPL (Europhysics Letters) 2004 10.1209/epl/i2003-10081-7
 
- Li, J.;  Zhou, Y.;  Ma, Z.;  Hyman, J.. Epidemiological Models for Mutating Pathogens. SIAM Journal on Applied Mathematics 2004 10.1137/S0036139903430185
 
 
 |