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T. Korzdorfer, S. Tretiak, and S. Kummel, ”Fluorescence
quenching in an organic donor-acceptor dyad: a first principles study”,
J.
Chem. Phys. 131 034310
(2009).
PDF file [800K]
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J. Tao, S. Tretiak, ”Optical
absorptions of new blue-light emitting oligoquinolines bearing pyrenyl and
triphenyl endgroups investigated with time-dependent density functional
theory”, J. Chem. Theory and Comput., 5, 866-872 (2009).
PDF file [700K]
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S. F. Alberti, V. Kleiman, S. Tretiak, A. Roitberg, ”Nonadiabatic molecular dynamics simulations of the energy
transfer between building blocks in a phenylene ethynylene dendrimer”,
J.
Phys. Chem. A, 113, 7535-7542
(2009).
PDF file [1.7Mb]
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S. Kilina, E. Badaeva, S. Tretiak, A. Piryatinski, A. Saxena, and A.R. Bishop, ”Bright and Dark Excitons in
Semiconductor Carbon Nanotubes: Insights from electronic structure
calculations”, Phys. Chem. Chem. Phys. (journal cover page)21, 4113 - 4123 (2009).
PDF file [1.3Mb]
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S. Kilina, S. Ivanov, and S. Tretiak ”Effect
of Surface Ligands on Optical and Electronic Spectra of Semiconductor
Nanoclusters”, J. Am. Chem. Soc., 131, 7717-7726 (2009).
PDF file [4.1Mb]
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C.Y. Wong, C. Curutchet, S. Tretiak, and G.D. Scholes, ”Ideal dipole approximation fails to predict electronic coupling
between semiconducting single wall carbon nanotubes”, J.
Chem. Phys. 130
081104 (2009).
PDF file [1.3Mb]
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S. Tretiak, C. Isborn, A.M. Niklasson, and W.M. Challacombe, ”Representation independent algorithms
for molecular response calculations in time-dependent self-consistent field
theories”, J. Chem. Phys. 130 054111
(2009).
PDF file [800K]
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D.A. Yarotski, S.V. Kilina, A. Talin, S. Tretiak, O.V. Prezhdo, A.V. Balatsky
and A.J. Taylor ”Scanning tunneling
microscopy of DNA-wrapped carbon nanotubes”, Nano Lett. 9 12-17 (2009).
PDF file [1.0Mb]
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V.K. Thorsmolle, R.D. Averitt, J. Demsar, D.L. Smith, S. Tretiak, R.L. Martin,
X. Chi, B.K. Crone, A.P. Ramirez and A.J. Taylor, ”Ultrafast exciton dynamics in polyacene organic
semiconductors”, Phys. Rev. Lett. 102 017401 (2009).
PDF file [500K]
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J. Tao, S. Tretiak, and J.-X. Zhu, ”Absorption
spectra of blue-light emitting oligoquinolines from time-dependent density
functional theory”, J. Phys. Chem. B 112 13701-13710 (2008).
PDF file [1.7Mb]
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C. Wu, S. Malinin, S. Tretiak, and V. Chernyak, ”Exciton Scattering Approach for branched conjugated molecules
and complexes III: Applications,” J. Chem. Phys. 129 174113 (2008).
PDF file [200K]
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C. Wu, S. Malinin, S. Tretiak, and V. Chernyak, ”Exciton Scattering Approach for branched conjugated molecules
and complexes II: Retrieving Exciton Scattering parameters from
quantum-chemical calculations,” J. Chem. Phys. 129 174112 (2008).
PDF file [300K]
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C. Wu, S. Malinin, S. Tretiak, and V. Chernyak, ”Exciton Scattering Approach for branched conjugated molecules
and complexes I: Formalism,” J. Chem. Phys. 129 174111 (2008).
PDF file [200K]
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F. Terenziani, C. Katan, M. Blanchard-Desce, E. Badaeva, and S. Tretiak, ”Enhanced two-photon absorption of
organic chromophores: theoretical and experimental assessments”, Adv.
Mat. (Review Article, journal
cover page) 20 1-38 (2008).
PDF file [1.7Mb]
Related journal cover page: PDF file [500K]
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M.J. Lucero, A.M. Niklasson, S. Tretiak, and W.M. Challacombe, ”Molecular-Orbital- Free Algorithm for
Excited States in Time-Dependent Perturbation Theory”, J.
Chem. Phys. 129 064114
(2008).
PDF file [700K]
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P. Yang, S. Tretiak, A.E.Masunov, and S. Ivanov, ”Quantum Chemistry of the Minimal CdSe Clusters”, J.
Chem. Phys. 129 074709
(2008).
PDF file [320K]
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S. Kilina, E.R. Batista, P. Yang, S. Tretiak, A. Saxena, R.L. Martin, and D.L.
Smith ”Electronic structure of
amorphous polyfluorene aggregates”, ACS Nano 2 1381-1388 (2008).
PDF file [1.9Mb]
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K. Becker, E. Da Como, J. Feldmann, F. Scheliga, E. Thorn Csányi, S.
Tretiak, J.M. Lupton, "How
chromophore shape controls photophysical function in phenylene-vinylenes",
J.
Phys. Chem. B 112
4859-4864 (2008).
PDF file [200K]
Related News & Views: PDF file [170K]
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S. Kilina, S. Tretiak, S.K. Doorn, Z. Luo, F. Papadimitrakopoulos, A.
Piryatinski, A. Saxena, R.L. Martin, and A.R. Bishop, "Cross-polarized Excitons of Carbon Nanotubes", Proc.
Nat. Acad. Sci. USA, 105
6797-6802 (2008).
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A. Piryatinski, S. Tretiak, and V. Chernyak, "Dynamical variational approach to non-adiabatic electronic
structure", Chem. Phys.
347 2538 (2008).
PDF file [320K]
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M. Galperin and S. Tretiak, ”Linear
optical response of current-carrying molecular junction: A NEGF-TDDFT
approach”, J. Chem. Phys.
128, 124705 (2008).
PDF file [200K]
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J. Tao, S. Tretiak, and J.-X. Zhu, ”Performance
of a non-empirical meta-GGA density functional for excitation energies”,
J. Chem. Phys. 128, 084110 (2008).
PDF file [100K]
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C. Wu, S. Malinin, S. Tretiak, and V. Chernyak, ” Multiscale Modeling
of Electronic Excitations in Branched Conjugated Molecules Using Exciton
Scattering Approach”, Phys.
Rev. Lett., 100, 057405 (2008).
PDF file [250K]
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E. Badaeva and S. Tretiak ”Two
photon absorption of extended substituted phenylenevinylene oligomers: a TDDFT
study”, Chem. Phys.
Lett., 450, 322-328 (2008).
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P. Yang, E. Batista, A. Saxena, R.L. Martin, S. Tretiak and D.L. Smith ”Effect of intra-molecular disorder
and inter-molecular electronic interactions on the electronic structure of
poly-p-phenylene vinylene (PPV)”, Phys. Rev. B (Rapid Comm.) 76, 241201
(2007).
PDF file [500K]
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S. Kilina and S. Tretiak, ”Excitonic
and vibrational properties of single-walled semiconducting carbon
nanotubes”, Adv. Func.
Mat. (Feature Article,
journal cover page) 17, 3405-3420 (2007).
PDF file [2.5Mb]
Related journal cover page: PDF file [500K]
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S. Kilina, S. Tretiak, D. Yarotskii, J.X. Zhu, N. Modine, A. Taylor and A.V.
Balatsky, ”Electronic properties of
DNA base molecules adsorbed on a metallic surface”, J. Phys. Chem. C, 111,
14541-14551 (2007).
PDF file [550K]
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K. Igumenshchev, S. Tretiak, and V. Chernyak, ”Excitonic effects in a time-dependent density functional
theory”, J. Chem. Phys.,
127, 114902 (2007).
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Z. Tang, N. Caculitan, M.S. Johal, P. Scudder, R.J. Magyar, S. Tretiak, and
H.-L. Wang, ”A Study of the
non-covalent interactions in Langmuir-Blodgett Films: An interplay between and
dipole-dipole interactions,” Thin
Solid Films, 516, 58-66 (2007).
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S.A. Ivanov, A. Piryatinski, J. Nanda, S. Tretiak, K. R. Zavadil, W. O. Wallace,
D. Werder, V.I. Klimov, ”Type-II
Core/Shell CdS/ZnSe nanocrystals: synthesis, electronic structures, and
spectroscopic properties,” J.
Am. Chem. Soc., 129, 11708-11719 (2007).
PDF file [500K]
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G.D. Scholes, S. Tretiak, T.J. McDonald, W.K. Metzger, C. Engtrakul, G.
Rumbles, and M.J. Heben, ”Low-lying
exciton states determine the photophysics of semiconducting single wall carbon
nanotube”, J. Phys.
Chem. C (journal cover page),
111, 11139-11149 (2007).
PDF file [620K]
Related journal cover page: PDF file [810K]
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S. Tretiak, ”Triplet absorption in
carbon nanotubes: a TD-DFT study,” Nano Letters (journal
cover page), 7, 2201-2206 (2007).
PDF file [500K]
Related journal cover page: PDF file [130K]
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C. Katan, F. Terenziani, C. Droumaguet, O. Mongin, M.H.V. Werts, A. Bain, E.
Badaeva, S. Tretiak, and M. Blanchard-Desce, ”Two-photon transitions in quadrupolar and branched chromophores:
experiment and theory”, J.
Phys. Chem. A, 111, 9468 - 9483 (2007).
PDF file [1.1Mb]
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A. Piryatinski, S. Tretiak, T.D. Sewell, and S.D. McGrane, ”Vibrational spectroscopy of polyatomic materials: Semiempirical
calculations of anharmonic couplings and IR Raman linewidth in naphthalene and
PETN crystals”, Phys.
Rev. B, 75, 214306 - 214315 (2007).
PDF file [840K]
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R. J. Magyar and S. Tretiak, ”The
implications of spurious charge-transfer in TDDFT on the accurate description
of large molecules and clusters,” J. Chem. Theory and Comput., 3, 976 - 987
(2007).
PDF file [870K]
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A. Tamulis, V. I. Tsifrinovich, S. Tretiak, G. P. Berman, D. L. Allara, ” Neutral Radical Molecules Ordered in Self-Assembled Monolayer Systems
for Quantum Information Processing”, Chem. Phys. Lett.,
436, 144 - 149 (2007).
PDF file [700K]
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P.T. Araujo, S.K. Doorn, S. Kilina, S. Tretiak, S. Maruyama, H. Chacham, M.A.
Pimenta and A. Jorio, ” Study of the third and fourth optical levels
in carbon nanotubes”, Phys. Rev. Lett., 98, 067401 (2007).
PDF file [1Mb]
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A.P. Shreve, E.H. Haroz, S.M. Bachilo, R.B. Weisman, S. Tretiak, S. Kilina, and
S.K. Doorn, ”Determination of
Exciton-Phonon Coupling Elements in Single-Walled Carbon Nanotubes by Raman
Overtone Analysis”, Phys. Rev. Lett., 98, 037405 (2007).
PDF file [200K]
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C. Wu, S. Tretiak, and V. Chernyak, ”Excited
states and optical response of a donor-acceptor substituted polyene: a TD-DFT
study,” Chem. Phys. Lett., 433, 305 – 311 (2007).
PDF file [230K]
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A. Piryatinski, S.A. Ivanov, S. Tretiak, and V.I. Klimov, ”Effect of Quantum and Dielectric Confinement on the
Exciton-Exciton Interaction Energy in Type-II Core/Shell Semiconductor
Nanocrystals,” Nano Letters, 7, 108 - 115
(2007).
PDF file [360K]
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S. Tretiak, S. Kilina, A. Piryatinski, A. Saxena, R.L. Martin and A.R. Bishop, ”Excitons and Peierls distortion in
conjugated carbon nanotubes,” Nano Letters, 7, 86 - 92 (2007).
PDF file [630K]
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Z. Tang, R. K. Hicks, R. J. Magyar, S. Tretiak, Y. Gao, H.-L. Wang, ”Synthesis and Characterization of
Amphiphilic Phenylene-Ethynylene Oligomers and Their Langmuir-Blodgett
Films”, Langmuir, 22,
8813-8820 (2006).
PDF file [270K]
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A. Piryatinski and S. Tretiak, ”Effect
of Quantum and Dielectric Confinements on the Exciton-Exciton Interaction
Energy in Type-II Core/Shell Semiconductor Nanocrystals,” SPIE
Newsroom 8, 384 (2006).
PDF file [170K]
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C. Wu, S. Malinin, S. Tretiak, and V. Chernyak, ”Exciton scattering and localization in branched dendrimeric
structures,” Nature Phys., 2, 631 - 635 (2006).
PDF file [760K]
Related News & Views: PDF file [150K]
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A. Gambetta, C. Manzoni, E. Menna, M. Meneghetti, G. Cerullo, G. Lanzani, S.
Tretiak, A. Piryatinski, A. Saxena, R. L. Martin and A. R. Bishop, ”Real time observation of non-linear
vibrational dynamics in semiconducting single wall carbon nanotubes,”
Nature
Phys., 2, 515-520 (2006).
PDF file [320K]
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J. Nanda, S. A. Ivanov, H. Htoon,
I. Bezel, A. Piryatinski, S. Tretiak, and V. I. Klimov, ”Absorption cross sections and Auger recombination lifetimes in
inverted core-shell nanocrystals: Implications for lasing performance”,
J.
Appl. Phys., 99, 034309
(2006).
PDF file [530K]
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J. F. Kauffman, J. M. Turner, I. V. Alabugin, B. Breiner, E. A. Badaeva, A.
Masunov, and S. Tretiak, ”Two-photon
excitation of substituted enediynes”, J. Phys. Chem. A, 110, 241-251 (2006).
PDF file [320K]
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A. Piryatinski, M. Stepanov,
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C. Katan, F. Terenziani, C. Le
Droumaguet, O. Mongin, M. H. V. Werts, S. Tretiak, and Mireille
Blanchard-Desce, "Branching of dipolar
chromophores: effects on linear and nonlinear optical properties," Proc. SPIE Vol. 5935, p. 13-27 in Linear and Nonlinear
Optics of Organic Materials V; Ed. Manfred Eich (2005).
PDF file [760K]
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E. A. Badaeva, T. V. Timofeeva, A. Masunov, S. Tretiak, "Role of donor-acceptor strengths and separation on the two-photon
absorption response of cytotoxic dyes: a TD-DFT study," J.
Phys. Chem. A, 109, 7276
(2005).
PDF file [750K]
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A. Masunov, S. Tretiak, J. W. Hong, B. Liu, and G. C. Bazan, "Theoretical study of the effects of
solvent environment on photophysical properties and electronic structure of
paracyclophane chromophores", J. Chem. Phys., 122, 224505 (2005).
PDF file [1.1Mb]
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C. Katan, L. Porrès, O. Mongin, M. H. V. Werts, F. Terenziani, T. Pons,
J. Mertz, S. Tretiak, and M.
Blanchard-Desce, "Effects of
(multi)branching of dipolar chromophores on photophysical properties and
two-photon absorption," J. Phys. Chem. A, 109, 3024 (2005).
PDF file [610K]
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S. Tretiak, K. Igumenshchev and V. Chernyak, "Exciton sizes of conducting polymers predicted by time-dependent
density functional theory", Phys. Rev. B, 71, 033201 (2005).
PDF file [610K]
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R. J. Magyar, S. Tretiak, Y.
Gao, H.-L. Wang and
A. P. Shreve, "A joint
theoretical and experimental study of phenylene-acetylene molecular wires",
Chem.
Phys. Lett., 401, 149
(2005).
PDF file [600K]
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S. Tretiak, A. Piryatinski, A. Saxena, R. L. Martin, and A. R. Bishop, "On the existence of photoexcited
breathers in conducting polymers," Phys. Rev. B, 70, 233203 (2004).
PDF file [64K]
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A. Piryatinski, S. Tretiak, A. Saxena, R. L. Martin, and A. R. Bishop "Three-pulse photon-echo spectroscopy
as a probe of the photoexcited electronic state manifold in coupled
electron-phonon system", Phys. Rev. B (Rapid Comm.), 70, 161404 (2004).
PDF file [240K]
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I. Franco and
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G. P. Bartholomew, M. Rumi, S. J. K. Pond, J. W. Perry, S. Tretiak and G. C.
Bazan "Two-photon absorption in
three-dimensional chromophores based on [2.2] - Paracyclophane," J.
Am. Chem. Soc., 126,
11529 (2004).
PDF file [210K]
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S. A. Ivanov, J. Nanda, A. Piryatinski, M. Achermann, L. P. Balet, I. V. Bezel,
P. O. Anikeeva, S. Tretiak, and V. I. Klimov, "Light amplification using inverted core/shell nanocrystals:
towards lasing in the single-exciton regime", J. Phys. Chem. B,
108, 10625 (2004).
PDF file [440K]
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N. Kobko, A. Masunov and
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A. Masunov and
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A. M. Moran, A. Myers Kelley, and S. Tretiak, "Excited state molecular dynamics simulations of nonlinear
push–pull chromophores," Chem. Phys. Lett., 367, 293 (2003).
PDF file [330K]
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S. Tretiak, R. L. Martin, A. Saxena, and A. R. Bishop, "Photoexcited breathers in conjugated polyenes: An excited state
molecular dynamics study," Proc. Nat. Acad. Sci. USA, 100, 2185 (2003).
PDF file [400K]
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I. Franco and
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S. Tretiak and V. Chernyak, "Resonant
nonlinear polarizabilities in the time-dependent density functional (TDDFT) theory,"
J.
Chem. Phys., 119, 8809
(2003).
PDF file [200K]
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S. Tretiak, R. L. Martin, A. Saxena, and A. R. Bishop, "Photoexcitation dynamics in polyconjugated molecules," Attidella
Fondazione Giorgio Ronchi, ANNO-LVIII, 6, 819 (2003).
PDF file [170K]
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I. H. Campbell, D. L. Smith,
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S. Tretiak, R. L. Martin, A. Saxena, and A. R. Bishop, "Conformational dynamics of photoexcited conjugated
molecules," Phys. Rev. Lett., 89, 97402 (2002).
PDF file [300K]
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S. Tretiak and
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S. A. Crooker, J. Hollingsworth,
PDF file [550K]
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K. A. Nguyen, R. Pachter, S. Tretiak, V. Chernyak, and S. Mukamel, "Analysis of absorption spectra of zinc
porphyrin, zinc meso-tetraphenylporphyrin, and halogenated derivatives,"
J.
Phys. Chem. B, 106,
10285 (2002).
PDF file [1Mb]
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S. Tretiak, R. L. Martin, A. Saxena, and A. R. Bishop, "Geometry relaxation of photoexcited states in conjugated
molecules," Phase Transitions, 75, 725 (2002).
PDF file [130K]
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V. Chernyak, S. Tretiak, E. V. Tsiper, T. Meier, and S. Mukamel, "Semiclassical effective Hamiltonian
for coupled electronic and nuclear optical response", CMT22
Workshop Proc., Vol. 14, Condensed Matter Theories, Vanderbilt
University, D. Ernst, Editor (2001).
PDF file [152K]
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J. Ern, A. T. Bens, H.-D. Martin, S. Mukamel, S. Tretiak, K. Tsyganenko, K. Kuldova,
H. P. Trommsdorff, C. Kryschi, "Reaction
dynamics of a photochromic fluorescing dithienylethene," J.
Phys. Chem. A, 105, 1741
(2001).
PDF file [120K]
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S. Tretiak, R. L. Martin, A. Saxena, and A. R. Bishop, "CEO/semiempirical calculations of static nonlinear
polarizabilities in conjugated molecules," J. Chem. Phys., 115, 699 (2001).
PDF file [270K]
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S. Tretiak, "Random phase
approximation/semiempirical computations of electronic structure of extended
organic molecules" Chapter in Recent Research Developments in Physical
Chemistry, 5th issue, p. 721 Kerala, India, (2001). [REVIEW]
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M. Schulz,
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S. Wang, G. C. Bazan, S. Tretiak, and
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A. Piryatinski,
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V. Chernyak,
PDF file [79K]
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J. Ern, A. T. Bens, H.-D. Martin, S. Mukamel, D. Schmid, S. Tretiak, E. V.
Tsiper, and C. Kryschi, "Femtosecond
reaction dynamics of a photochromic dithienylethene derivative", J.
Lum., 87-9, 742 (2000).
PDF file [134K]
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T. Minami, S. Tretiak, V. Chernyak, and
PDF file [146K]
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S. Tretiak, C. Middleton, V. Chernyak, and
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S. Tretiak, "Effective Computing at
CNLS", Published on Web: http://cnls.lanl.gov/Internal/Computing/Software/cnls_computation_ug.pdf,
(2000).
PDF file [94K]
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V. Chernyak,
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S. Tretiak, C. Middleton, V. Chernyak, and S. Mukamel, “Localized and Delocalized Electronic Excitations in Biological
and Artificial Antenna Complexes", Photoinduced Charge Transfer,
L. Rothberg, Editor (World Scientific, 2000).
PDF file [630K]
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S. Tretiak, A. Saxena, R. L. Martin, and A. R. Bishop, "Interchain Electronic Excitations in Poly(phenylenevinylene)
(PPV) Aggregates", J. Phys. Chem. B, 104, 7029
(2000).
PDF file [560K]
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S. Tretiak, C. Middleton, V. Chernyak, and
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S. Tretiak, A. Saxena, R. L. Martin, and A. R. Bishop, "CEO/semiempirical calculations of uv-visible spectra in
conjugated molecules", Chem. Phys. Lett, 331, 561
(2000).
PDF file [420K]
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S. Tretiak "Collective Electronic
Excitations in Spectroscopy of Conjugated and Aggregated Molecules", Ph.D.
Thesis, University of
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E. V. Tsiper, V. Chernyak, S. Tretiak, and
PDF file [80K]
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E. Y. Poliakov, V. Chernyak, S. Tretiak, and S. Mukamel, "Exciton-scaling and optical excitations of self-similar
Phenylacetylene Dendrimers", J. Chem. Phys., 110,
8161 (1999).
PDF file [350K]
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E. V. Tsiper, V. Chernyak, S. Tretiak, and S. Mukamel, "Density-matrix-spectroscopic-algorithm for excited state
adiabatic surfaces and molecular dynamics of a protonated Schiff base",
J. Chem. Phys., 110, 8328 (1999).
PDF file [300K]
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S. Tretiak, V. Chernyak, and S. Mukamel, "Electronic
screening in second order optical polarizabilities of elongated donor/acceptor
polyenes", Chem. Phys., 245, 145 (1999).
PDF file [6.3Mb]
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J. Ern, A. T. Bens, H.-D. Martin, S. Mukamel, D. Schmid, S. Tretiak, E. Tsiper
and C. Kryschi, "Reaction dynamics
of photochromic dithienylethene derivates", Chem. Phys., 246, 115 (1999).
PDF file [480K]
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V. Chernyak, E. Y. Poliakov,
PDF file [426K]
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V. Chernyak, E. Y. Poliakov,
PDF file [520K]
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S. Tretiak, W. M. Zhang, V. Chernyak, and
PDF file [545K]
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S. Tretiak, V. Chernyak, and S. Mukamel, "Origin,
Scaling, and Saturation of Second Order Polarizabilities in Donor/Acceptor
Polyenes", Chem. Phys. Lett., 287, 75 (1998).
PDF file [500K]
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S. Tretiak, V. Chernyak, and
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Related journal cover page: PDF file [210K]
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G. C. Bazan, W. J. Oldham, Jr., R. J. Lachicotte, S. Tretiak, V. Chernyak, and
S. Mukamel, "Stilbenoid Dimers:
Dissection of a Paracyclophane Chromophore", J. Am. Chem. Soc.,
120, 9188 (1998).
PDF file [830K]
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S. Tretiak, V. Chernyak, and
PDF file [630K]
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S. Tretiak, V. Chernyak, and S. Mukamel, "Real-space
analysis of electronic excitations in free-base (H2P) and magnesium
(MgP) porphins", Chem. Phys. Lett., 297, 357
(1998).
PDF file [350K]
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T. Meier, S. Tretiak, V. Chernyak, and S. Mukamel, "Electronic-Oscillator Analysis of Femtosecond Four-Wave Mixing in
Conjugated Polyenes", Phys. Rev. B, 55, 4960 (1997).
PDF file [365K]
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S. Mukamel,
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S. Tretiak, V. Chernyak, and
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S. Tretiak, V. Chernyak, and
PDF file [315K]
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S. Tretiak, V. Chernyak, and S. Mukamel, "Recursive
Density-Matrix-Spectral-Moment Algorithm for Molecular Nonlinear
Polarizabilities", J. Chem. Phys., 105, 8914 (1996).
PDF file [325K]
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S. Tretiak, V. Chernyak, and
PDF file [144K]
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