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  1. Implications of Rewiring Bacterial Quorum Sensing‏‎ (10:53, 13 June 2008)
  2. Simple Models for Biomembrane Structure and Dynamics‏‎ (16:20, 22 August 2008)
  3. The Possibility of Automated Experiments for Inference of Metabolic Models‏‎ (22:47, 22 August 2008)
  4. On the origin of symmetry in biology: Protein oligomers‏‎ (09:33, 26 August 2008)
  5. Discovering the role of Protein Dynamics in RNA recognition motifs‏‎ (11:37, 2 September 2008)
  6. Modelling of the Mitotic Spindle Assembly Checkpoint using SimBiology‏‎ (11:49, 30 September 2008)
  7. Origin of the Domestic Dog‏‎ (17:26, 1 October 2008)
  8. HIV Vaccines‏‎ (17:27, 1 October 2008)
  9. An Engineer's View of the Cell‏‎ (17:27, 1 October 2008)
  10. Contact Us‏‎ (17:34, 1 October 2008)
  11. Proteins Behaving Badly: Misfolding and Alzheimer's Disease‏‎ (20:11, 1 October 2008)
  12. The Energetics and Mechanistic Roles of Protein Conformational Dynamics‏‎ (17:51, 2 October 2008)
  13. Adapting stochastic simulation to suit biology and biological data to suit simulation‏‎ (17:52, 2 October 2008)
  14. 13C-based Metabolic Flux Analysis of Environmental Microorganisms‏‎ (17:52, 2 October 2008)
  15. Biology by design: reduction and synthesis of cellular networks‏‎ (13:35, 13 October 2008)
  16. A Single-Cell View of Multiple Antibiotic Resistance in Escherichia coli‏‎ (13:39, 26 October 2008)
  17. The thermal response and motor behavior of E. coli and C. elegans‏‎ (13:43, 28 October 2008)
  18. Genome-scale analysis of protein-protein interaction networks‏‎ (13:50, 6 November 2008)
  19. Modeling dynamic molecular compartments: the bigraphical approach‏‎ (18:28, 9 November 2008)
  20. Learning signaling pathway structure from high throughput, multivariate single cell data‏‎ (11:44, 10 November 2008)
  21. Exploring mechanisms of oscillations in p53 and NF-κB systems‏‎ (18:56, 20 November 2008)
  22. Theoretical and Experimental Analysis of Chemotactic Systems in Biology‏‎ (14:33, 4 December 2008)
  23. Modeling hepatitis C virus (HCV) dynamics: Relating intracellular (in vitro) and extracellular (in vivo) HCV kinetics under treatment‏‎ (13:10, 18 December 2008)
  24. Simple mathematical models to understand influenza’s complex evolutionary dynamics‏‎ (15:06, 13 January 2009)
  25. Specificity and satisfiability in biological information processing networks‏‎ (22:10, 19 January 2009)
  26. Theory of microtubule depolymerization by kinesin-8 motors‏‎ (21:42, 25 January 2009)
  27. Tracking single quantum dots in three dimensions: Following cell receptor traffic and membrane topology‏‎ (10:04, 29 January 2009)
  28. Learning design principles from noisy small gene regulatory networks‏‎ (18:47, 29 January 2009)
  29. Cellular Network Based Identification of Master Regulators of Physiological and Oncogenic Processes‏‎ (22:22, 2 February 2009)
  30. Biophysics of anthrax toxin inhibition by derivatives of beta-cyclodextrin‏‎ (00:21, 16 February 2009)
  31. Coordinate regulation of virulence in Salmonella typhimurium‏‎ (12:42, 17 February 2009)
  32. Model Reduction of Rule-based ODE Models: Exact vs. Approximate Approach‏‎ (13:48, 9 March 2009)
  33. Defending against anthrax: Cell membrane channels and drug design‏‎ (21:30, 12 March 2009)
  34. Understanding adaptive immunity: a crossroad of the physical and life sciences‏‎ (14:18, 16 March 2009)
  35. Computational Modeling of Interactions in Dynamic Biological Networks‏‎ (15:35, 18 March 2009)
  36. Programming Cells: Using a Synthetic Light Sensor as a Fast, High-Resolution Input to Signaling Networks‏‎ (23:32, 26 March 2009)
  37. Learning mechanistic models of gene expression regulation from natural sequence variation‏‎ (09:15, 30 March 2009)
  38. Stochastic Biological Circuits: Noise as a Phenotype‏‎ (09:16, 30 March 2009)
  39. Lecture‏‎ (19:48, 12 April 2009)
  40. The Flagellar Length Control System‏‎ (17:08, 27 April 2009)
  41. Vaccine Design for Influenza and Dengue Fever‏‎ (17:48, 27 April 2009)
  42. Programming RNA Devices to Control Cellular Information Processing‏‎ (17:56, 29 April 2009)
  43. The Joint BioEnergy Institute‏‎ (12:27, 1 May 2009)
  44. Programming Cells‏‎ (14:16, 15 May 2009)
  45. On two problems in medicine - a view from a crossroad of disciplines‏‎ (14:51, 15 May 2009)
  46. Genetic circuit architectures underlying cell-fate choices for immunity‏‎ (01:02, 25 May 2009)
  47. Mechanical roles of the bacterial cytoskeleton‏‎ (12:55, 31 May 2009)
  48. Dynamical signature of the core promoter‏‎ (15:59, 16 June 2009)
  49. Quantitative Analysis of Constructive Stochastic Designs in Biological Systems‏‎ (16:07, 16 June 2009)
  50. Single-molecule meets scaling: the low-force elasticity of single-stranded DNA‏‎ (12:58, 1 July 2009)
  51. Wiring The Brain‏‎ (10:20, 6 July 2009)
  52. TAM receptor regulation of the innate immune response‏‎ (14:57, 6 July 2009)
  53. How liquid is biological signaling? - using random graphs to study protein networks‏‎ (16:49, 7 July 2009)
  54. Cracking the Neural Code‏‎ (18:35, 16 July 2009)
  55. Selectivity of transport through the nuclear pore complex: from nuclear import to bio-sensors‏‎ (10:43, 17 July 2009)
  56. EGF receptor in the lime light‏‎ (20:49, 19 July 2009)
  57. Unraveling a pandemic: from avian to swine influenza‏‎ (11:40, 27 July 2009)
  58. Past Lectures‏‎ (17:29, 30 July 2009)
  59. Nano-world of wound and heart healing‏‎ (08:26, 31 July 2009)
  60. How proteins acquired their tricks: Physical basis of protein structure and function‏‎ (14:34, 10 September 2009)
  61. Rule-Based Computational Modeling of Modular Signaling Protein Interactions‏‎ (17:59, 11 September 2009)
  62. Development of Methods to Combine Sequence, Structure, and Network Analyses to Study Gene Annotation, Coevolution, and Allostery in Protein:RNA Complexes‏‎ (17:09, 13 September 2009)
  63. PROTEIN CONFORMATIONAL AND INTERACTION DYNAMICS BY MOLECULAR DYNAMICS SIMULATIONS AND NUCLEAR MAGNETIC RESONANCE EXPERIMENTS‏‎ (09:55, 18 September 2009)
  64. Protein Conformational and Interaction Dynamics by Molecular Dynamics Simulations and Nuclear Magnetic Resonance Experiments‏‎ (09:57, 18 September 2009)
  65. Single Molecule Fluorescence Studies of Nucleocytoplasmic Transport‏‎ (12:53, 28 September 2009)
  66. Proteomic analysis on a MALDI-MS platform‏‎ (15:18, 28 September 2009)
  67. Conformation relaxation dynamics of biomolecules‏‎ (14:37, 14 October 2009)
  68. Artificial Nanopores that Mimic the Transport Selectivity of the Nuclear Pore Complex‏‎ (11:47, 16 October 2009)
  69. Structural and cellular dynamics in vascular development‏‎ (17:03, 22 October 2009)
  70. Escherichia coli Cultures in Temperature Gradients‏‎ (12:09, 2 November 2009)
  71. Single molecule study on the disassembly reaction of snare complex‏‎ (12:50, 4 November 2009)
  72. Single molecule study of disassembly of SNARE complex by NSF/α−SNAP‏‎ (12:51, 4 November 2009)
  73. Kinetics of peptide folding in dehydrated and crowded environments‏‎ (14:52, 20 November 2009)
  74. A Mechanism for Shear Energy Dissipation in Articular Cartilage‏‎ (14:19, 11 December 2009)
  75. A cell kinetics model for prostate cancer and its application to clinical data and individual patients‏‎ (17:36, 14 December 2009)
  76. Neutralizing antibody responses in HIV-1 and nonpathogenic SIV infection‏‎ (09:57, 12 January 2010)
  77. Expression and Function of Antibody Fc Receptors on Human Airway Smooth Muscle Cells‏‎ (16:13, 21 January 2010)
  78. Neuronal couplings between retinal ganglion cells inferred by efficient inverse statistical physics methods‏‎ (13:12, 23 February 2010)
  79. Journey through the cell‏‎ (18:45, 23 February 2010)
  80. How the sea urchin embryo gets its cleavage furrows (in the right place)‏‎ (13:15, 24 February 2010)
  81. The q-bio Public Lecture Series‏‎ (12:51, 26 February 2010)
  82. Agent-based modeling workshop‏‎ (16:16, 26 February 2010)
  83. Nanoscience workshop‏‎ (17:17, 26 February 2010)
  84. Feedback Control with Bio-molecular Circuits‏‎ (14:14, 2 March 2010)
  85. Sensory estimation of ligand concentrations by a single receptor and a receptor array‏‎ (13:43, 3 March 2010)
  86. Discrete Stochastic Simulation of Spatially Inhomogeneous Biochemical Systems‏‎ (17:43, 15 March 2010)
  87. Cooperation and reversibility in microbial evolution‏‎ (10:50, 16 March 2010)
  88. Characterization of the Complexity of Signaling Complexes in Human T Cells‏‎ (11:09, 26 April 2010)
  89. Multiparameter Computational Modeling of Tumor Invasion‏‎ (21:10, 6 May 2010)
  90. From Robots to Molecules: Intelligent Motion Planning and Analysis with Probabilistic Roadmaps‏‎ (16:14, 10 May 2010)
  91. Noisy out of necessity: the relationship among gene circuit architecture, dynamics and biological function‏‎ (11:41, 15 May 2010)
  92. Dynamic disorder in single enzyme kinetics: effects of conformational fluctuations‏‎ (09:44, 20 May 2010)
  93. Diffusion in living cells: simple or anomalous?‏‎ (11:44, 26 May 2010)
  94. Robust multicellular computing using genetically-encoded NOR gates and chemical “wires”‏‎ (06:44, 12 July 2010)
  95. A single molecule view of cell fate: FISHing for worm guts‏‎ (15:42, 26 July 2010)
  96. The Art and Science of Systems Biology‏‎ (15:12, 22 September 2010)
  97. Computer-Aided Drug Repurposing‏‎ (14:04, 12 October 2010)
  98. Variability in HIV Vaccine Design‏‎ (14:55, 21 October 2010)
  99. Nanomedicine and chemical imaging approaches for traumatic spinal cord injury‏‎ (10:53, 25 October 2010)
  100. Study of protein-RNA interactions by using fluorescence resonance energy transfer (FRET) and single-molecule FRET (smFRET)‏‎ (16:09, 25 October 2010)

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