Difference between revisions of "Past Seminars"

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*Winter/Spring, 2009
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*Fall 2010
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*:'''October 19, 2010''': [http://biocomp.health.unm.edu/people/tudor.shtml Tudor Oprea], University of New Mexico, [[Computer-Aided Drug Repurposing]]
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*:'''October 26, 2010''': [http://www.t6.lanl.gov/btk/ Bette Korber], T-6, LANL, [[Variability in HIV Vaccine Design]]
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*:'''November 2, 2010''': Yunzhou Sophia Shi, Purdue University [[Nanomedicine and chemical imaging approaches for traumatic spinal cord injury]]
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*:'''November 8, 2010''': Rajan Lamichhane, Wayne State University [[Study of protein-RNA interactions by using fluorescence resonance energy transfer (FRET) and single-molecule FRET (smFRET)]] '''Special Time: Monday at 11:00-12:00'''
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*:'''November 16, 2010''': [http://www.lanl.gov/projects/gfp/Inventors.shtml Geoffrey Waldo], LANL. '''Special Time: 3:00-4:00pm''' [[Protein tagging and labeling systems for protein chemistry and cellular biology.]]
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*:'''December 7, 2010''': Dmitry Novikov, NYU Medical Center [[NMR relaxation and diffusion in biological tissues and heterogeneous media]]
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*:'''December 21, 2010''': Cesar Lopez Bautista, University of Groningen, [[The Martini force field: Different flavors for molecular simulations]] ''' Special Time: 10AM'''
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*Summer 2010
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*:'''Aug 24''': [http://www.ices.utexas.edu/directory/researchers/ Srabanti Chaudhury], University of Texas, Austin, [[Dynamic disorder in single enzyme kinetics: effects of conformational fluctuations]]
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*:'''Aug 17''': [http://voigtlab.ucsf.edu/index.html Chunbo Lou], University of California at San Francisco*:'''Jul 20''': [http://voigtlab.ucsf.edu/index.html Alvin Tamsir], University of California at San Francisco [[Robust multicellular computing using genetically-encoded NOR gates and chemical “wires”]]
 +
*:'''Aug 10''': [http://www.bioinfo.rpi.edu/bystrc/index.html/ Chris Bystroff], Rensselaer Polytechnic Institute, [[GFP-based Biosensors]] '''NB: this talk will take place in Room 203A/B, Building 4200, TA-3; this room is on the same floor as Hot Rocks Java Cafe in the Los Alamos Research Park building.'''
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*:'''Aug 3''': [http://rajlab.seas.upenn.edu/ Arjun Raj], University of Pennsylvania [[A single molecule view of cell fate: FISHing for worm guts]] '''NB: this talk will take place in Room 203A/B, Building 4200, TA-3; this room is on the same floor as Hot Rocks Java Cafe in the Los Alamos Research Park building.'''
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*:'''Jul 27''': [http://research.microsoft.com/en-us/people/jfisher/ Jasmin Fisher], Microsoft Research Cambridge
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*Spring 2010
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*:'''Jun 2''': [http://www.physics.mcmaster.ca/people/faculty/Fradin_MC_h.html Cécile Fradin], McMaster University,[[Diffusion in living cells: simple or anomalous?]] '''NB: this talk is scheduled for a Wednesday 2:00 pm'''
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*:'''May 25''': [http://parasol.tamu.edu/~ltapia/ Lydia Tapia], University of Texas, Austin, [[From Robots to Molecules: Intelligent Motion Planning and Analysis with Probabilistic Roadmaps]], '''NB: this talk is scheduled to start at 2:30 pm'''
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*:'''May 18''': [http://www.uiowa.edu/microbiology/houtman.shtml Jon Houtman], University of Iowa, [[Characterization of the Complexity of Signaling Complexes in Human T Cells]]
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*:'''May 11''': [http://cristinilab.shis.uth.tmc.edu/ Vittorio Cristini], University of Texas Health Science Center, Houston, [[Multiparameter Computational Modeling of Tumor Invasion]]
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*:'''May 4''': [http://www4.utsouthwestern.edu/suellab/ Gurol Suel], UT Southwestern Medical School, [[Noisy out of necessity: the relationship among gene circuit architecture, dynamics and biological function]]
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*:'''Apr 20''': [http://www.lps.ens.fr/~cocco/ Simona Cocco], [[Neuronal couplings between retinal ganglion cells inferred by efficient inverse statistical physics methods]]
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*:'''Apr 6''': [http://cohengroup.ccmr.cornell.edu Itai Cohen], Cornell University, [[A Mechanism for Shear Energy Dissipation in Articular Cartilage]]
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*Winter 2010
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*:'''Mar 23''': [http://www.me.ucsb.edu/dept_site/people/new_faculty_pages/petzold_page.html Linda Petzold], University of California, Santa Barbara, [[Discrete Stochastic Simulation of Spatially Inhomogeneous Biochemical Systems]]
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*:'''Mar 9''': [http://www.picb.ac.cn/picb-dynamic/Desktop/staff/ergroupview.jsp?ntype=15&model=basic#106 Jin Yang], Chinese Academy of Sciences-Max Planck Society Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, [[Sensory estimation of ligand concentrations by a single receptor and a receptor array]]
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*:'''Mar 2''': [http://soslab.ee.washington.edu/mw/index.php/User:Klavins Eric Klavins], University of Washington, [[Feedback Control with Bio-molecular Circuits]]
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*:'''Jan 26''': [http://www.pharmacology.unimelb.edu.au/research/GrahamLab.html Graham Mackay], University of Melbourne, [[Expression and Function of Antibody Fc Receptors on Human Airway Smooth Muscle Cells]]
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*:'''Jan 12''': [http://pathology.emory.edu/AdminFacultyMember.cfm?Name_seq=1239 Cynthia A. Derdeyn], Emory University,[[Neutralizing antibody responses in HIV-1 and nonpathogenic SIV infection ]]
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*:'''Jan 5''': Bin Hu, University of New Mexico
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*:'''Dec 22''': [http://www.neurosurgery.emory.edu/FacultyVanMeir.htm Erwin Van Meir], Emory University
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*Fall 2009
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*:'''Dec 16''': Guy Dimonte, X-1, [[A cell kinetics model for prostate cancer and  its application to clinical data and individual patients]] ''NB: this seminar talk is on a Wednesday, 1 PM - 2 PM''
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*:'''Dec 15''': [http://research.brown.edu/myresearch/Elaine_Bearer Elaine L. Bearer], University of New Mexico School of Medicine, Computational modeling of tumor progression: from physical laws to biological prediction
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*:'''Dec 8''': [http://www.mit.edu/~gneuert/index.htm Gregor Neuert], Massachusetts Institute of Technology
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*:'''Dec 1''': [http://www.chem.upenn.edu/chem/research/faculty.php?id=20 Feng Gai], University of Pennsylvania, [[Kinetics of peptide folding in dehydrated and crowded environments]]
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*:'''Nov 24''': Jaeymeong Jung, Howard Hughes Medical Institute, Stanford University, [[Single molecule study of disassembly of SNARE complex by NSF/α−SNAP]]
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*:'''Nov 17''': Srinivas Iyer, Bioscience Division, Los Alamos National Laboratory, [[Proteomic analysis on a MALDI-MS platform]]
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*:'''Nov 9''': [http://www.phyast.pitt.edu/people/fprofile.php?id=372 Hanna Salman], University of Pittsburgh,[[Escherichia coli Cultures in Temperature Gradients]] ''This seminar is on MONDAY Nov 9th''
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*:'''Nov 3''': [http://bioimaging.caltech.edu/people/lansford/ Rusty Lansford], California Institute of Technology, [[Structural and cellular dynamics in vascular development]]
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*:'''Nov 2''': [http://reedlab.che.wisc.edu/group-members.html Dipak Barua], University of Wisconsin, [[Rule-Based Computational Modeling of Modular Signaling Protein Interactions]] ''This seminar is at 11 AM on Monday, November 2''
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*:'''Oct 29''': [http://www.physics.nau.edu/~young/ Robert D. Young], Northern Arizona University, [[Conformation relaxation dynamics of biomolecules]] ''NB: this seminar talk is on a Thursday, 10 AM - 11 AM''
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*:'''Oct 20''': [http://www.nichd.nih.gov/about/staff/bio.cfm?nih_id=0014326490/ Tijana Jovanovic-Talisman], National Institutes of Health, [[Artificial Nanopores that Mimic the Transport Selectivity of the Nuclear Pore Complex]]
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*:'''Oct 6''': [http://medicine.tamhsc.edu/basic-sciences/mcm/faculty/siegfried-musser.html Sigfried Musser], Texas A&M University, [[Single Molecule Fluorescence Studies of Nucleocytoplasmic Transport]]
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*:'''Oct 1''': [http://www.burnham.org/default.asp?contentID=292 Boguslaw Stec], Burnham Institute for Medical Research, [[How proteins acquired their tricks: Physical basis of protein structure and function]] ''This seminar is at 10 AM on Thursday, October 1''
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*:'''Sep 22''': Dr. Nikolaos G. Sgourakis, [[Protein Conformational and Interaction Dynamics by Molecular Dynamics Simulations and Nuclear Magnetic Resonance Experiments]], Center for Biotechnology and Interdisciplinary studies, RPI
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*:'''Sep 15''': Dr. Anurag Sethi, [[Development of Methods to Combine Sequence, Structure, and Network Analyses to Study Gene Annotation, Coevolution, and Allostery in Protein:RNA Complexes]], Theoretical Division, Los Alamos National Laboratory
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*Summer 2009
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*:'''Aug 4''': [http://www.ludwig.edu.au/branch/research/cell-biophysics.htm Andrew H. Clayton], Ludwig Institute for Cancer Research, [[EGF receptor in the lime light]]
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*:'''July 28''': [http://www.t6.lanl.gov/ruy/ Ruy M. Ribeiro], Los Alamos National Laboratory, [[Unraveling a pandemic: from avian to swine influenza]]
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*:'''July 21''': [http://cnls.lanl.gov/External/people/Anton_Zilman.php Anton Zilman], Los Alamos National Laboratory, [[Selectivity of transport through the nuclear pore complex: from nuclear import to bio-sensors]]
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*:'''July 14''': Linus J. Schumacher, University of Cambridge, [[How liquid is biological signaling? - using random graphs to study protein networks]]
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*:'''July 7''': [http://www1.engr.ucsb.edu/~saleh/ Omar Saleh], University of California, Santa Barbara, [[Single-molecule meets scaling: the low-force elasticity of single-stranded DNA]]
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*:'''June 30''': Kim Ø. Rasmussen, Los Alamos National Laboratory, [[Dynamical signature of the core promoter]]
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*:'''June 23''': Michael Samoilov, QB3/University of California, Berkeley and Lawrence Berkeley National Laboratory, [[Quantitative Analysis of Constructive Stochastic Designs in Biological Systems]]
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*:'''June 16''': [http://www.voigtlab.ucsf.edu/ Christopher A. Voigt], University of California, San Francisco, [[Programming Cells: Using a Synthetic Light Sensor as a Fast, High-Resolution Input to Signaling Networks]]
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*:'''June 9''': [http://dinner-group.uchicago.edu/ Aaron R. Dinner], University of Chicago, [[Genetic circuit architectures underlying cell-fate choices for immunity]]
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*:'''June 2''': [http://genomics.princeton.edu/shaevitzlab Joshua Shaevitz], Princeton University, [[Mechanical roles of the bacterial cytoskeleton]]
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*Winter/Spring 2009
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*:'''May 26''': [http://cci.lbl.gov/~paul/ Paul D. Adams], Lawrence Berkeley National Laboratory, [[The Joint BioEnergy Institute]]
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*:'''May 12''': [http://biochemistry.ucsf.edu/labs/marshall/ Wallace Marshall], University of California, San Francisco, [[The Flagellar Length Control System]]
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*:'''May 5''': [http://openwetware.org/wiki/Smolke Christina D. Smolke], Stanford University, [[Programming RNA Devices to Control Cellular Information Processing]]
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*:'''Apr 28''': [http://www.mwdeem.rice.edu/ Michael W. Deem], Rice University, [[Vaccine Design for Influenza and Dengue Fever]]
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*:'''Apr 21''': [http://web.mit.edu/akcgroup/ Arup K. Chakraborty], Massachusetts Institute of Technology, [[Understanding adaptive immunity:  a crossroad of the physical and life sciences]]
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*:'''Apr 14''': [http://biochemistry.ucsf.edu/labs/elsamad/home/index.html Hana El-Samad], University of California, San Francisco, [[Stochastic Biological Circuits: Noise as a Phenotype]]
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*:'''Apr 7''': [http://bussemaker.bio.columbia.edu/lab/ Harmen Bussemaker], Columbia University, [[Learning mechanistic models of gene expression regulation from natural sequence variation]]
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*:'''Mar 31''': [http://sysbio.med.harvard.edu/faculty/sorger/ Holger Conzelmann], Harvard Medical School, [[Model Reduction of Rule-based ODE Models: Exact vs. Approximate Approach]]
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*:'''Mar 24''': [http://www.cs.nmsu.edu/~joemsong/ Mingzhou Song], New Mexico State University, [[Computational Modeling of Interactions in Dynamic Biological Networks]]
 
*:'''Mar 17''': [http://smt.nichd.nih.gov/katya.htm Ekaterina Nestorovich], NIH, [[Biophysics of anthrax toxin inhibition by derivatives of beta-cyclodextrin]]
 
*:'''Mar 17''': [http://smt.nichd.nih.gov/katya.htm Ekaterina Nestorovich], NIH, [[Biophysics of anthrax toxin inhibition by derivatives of beta-cyclodextrin]]
 
*:'''Mar 10''': [http://fds.duke.edu/db/aas/Biology/faculty/katia.koelle Katia Koelle], Duke University, [[Simple mathematical models to understand influenza’s complex evolutionary dynamics]] This lecture will begin at 2:30 instead the usual time of 2:15.
 
*:'''Mar 10''': [http://fds.duke.edu/db/aas/Biology/faculty/katia.koelle Katia Koelle], Duke University, [[Simple mathematical models to understand influenza’s complex evolutionary dynamics]] This lecture will begin at 2:30 instead the usual time of 2:15.
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*:'''Jan 13''': [http://eec.wustl.edu/About/People.asp?PersonID=3164&Org=EEC Yinjie Tang], Washington University, St. Louis, [[13C-based Metabolic Flux Analysis of Environmental Microorganisms]]
 
*:'''Jan 13''': [http://eec.wustl.edu/About/People.asp?PersonID=3164&Org=EEC Yinjie Tang], Washington University, St. Louis, [[13C-based Metabolic Flux Analysis of Environmental Microorganisms]]
 
*:'''Jan 6''': Harel Dahari, University of Illinois, Chicago, [[Modeling hepatitis C virus (HCV) dynamics: Relating intracellular (in vitro) and extracellular (in vivo) HCV kinetics under treatment]]
 
*:'''Jan 6''': Harel Dahari, University of Illinois, Chicago, [[Modeling hepatitis C virus (HCV) dynamics: Relating intracellular (in vitro) and extracellular (in vivo) HCV kinetics under treatment]]
−
*Fall, 2008
+
*Fall 2008
 
*:'''Dec 9''': [http://www.lix.polytechnique.fr/~krivine/ Jean Krivine], Harvard Medical School, [[Modeling dynamic molecular compartments: the bigraphical approach]]
 
*:'''Dec 9''': [http://www.lix.polytechnique.fr/~krivine/ Jean Krivine], Harvard Medical School, [[Modeling dynamic molecular compartments: the bigraphical approach]]
 
*:'''Dec 2''': [http://http://www.genomics.princeton.edu/ryulab/ William Ryu], University of Toronto, [[The thermal response and motor behavior of E. coli and C. elegans]]
 
*:'''Dec 2''': [http://http://www.genomics.princeton.edu/ryulab/ William Ryu], University of Toronto, [[The thermal response and motor behavior of E. coli and C. elegans]]

Latest revision as of 14:35, 11 February 2011

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